PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT31413
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family WRKY
Protein Properties Length: 231aa    MW: 24545.6 Da    PI: 10.1261
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT31413genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY98.35e-31166223359
               -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
      WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
               D y+WrKYGqK++kgs++pr YYrC++a gCp++k+ver+++dp ++++tYeg+H+h+
  EMT31413 166 DDYSWRKYGQKPIKGSPYPRCYYRCSTAkGCPARKHVERATDDPAMLIVTYEGDHRHD 223
               99***********************9998****************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF105334.4E-16119162IPR018872Zn-cluster domain
Gene3DG3DSA:2.20.25.807.4E-33151224IPR003657WRKY domain
SuperFamilySSF1182902.88E-27159224IPR003657WRKY domain
PROSITE profilePS5081131.135159225IPR003657WRKY domain
SMARTSM007745.6E-37164224IPR003657WRKY domain
PfamPF031063.7E-27166222IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    Send to blast
MQEAARKDVE MASAVLQAHW GIVATEAARV AKLKRKQDRV VRHLQGYIVI SDSSSDDRSD  60
GSDAPAAAAA ASVTSTSFFS SVTAGGEGSV SKGPGQLVSS GKPPLAAGTK RKQQQQQTPC  120
ASGAHSDVAA AAAGGRCHCS KKRKHRVKYT PRVPAVSSRT ADIPGDDYSW RKYGQKPIKG  180
SPYPRCYYRC STAKGCPARK HVERATDDPA MLIVTYEGDH RHDTLPPAAA N
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A3e-24152228276WRKY transcription factor 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKM2013861e-100KM201386.1 Stipa purpurea putative WRKY transcription factor 11 mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003571564.13e-61PREDICTED: probable WRKY transcription factor 17
SwissprotQ9SV157e-57WRK11_ARATH; Probable WRKY transcription factor 11
TrEMBLM8CB881e-168M8CB88_AEGTA; Uncharacterized protein
STRINGMLOC_66612.12e-90(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP61738171
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31550.23e-46WRKY DNA-binding protein 11